Immune Dictionary
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IREA Software
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Immune Response Enrichment Analysis
Analyze your own gene expression data. See Figure 5 from
publication
for details.
Gene List
Gene Matrix
Input Genes
i
A list of genes you would like to investigate, such as differentially expressed genes obtained from DESeq2 or Seurat FindMarkers.
Sample Mouse Genes
Sample Human Genes
Clear Genes
Choose cell type
--- Select cell type ---
B_cell
cDC1
cDC2
Langerhans
Macrophage
MigDC
Monocyte
Neutrophil
NK_cell
pDC
T_cell_CD4
T_cell_CD8
T_cell_gd
Treg
Choose species
Mouse
Human
Optional Parameters
Method
Score (default)
Hypergeometric test
Submit
Analyze Cell Polarization
Analyze Cytokine Response
To interpret cell polarization analysis output, please refer to the "Reference Cards" tab above for detailed info of each polarization state.
Submit a list of input genes to see IREA results here.
Use example file
Upload your own
Use example file
Download Example File
Gene matrix file (.txt/.xls/.xlsx)
Choose cell type
--- Select cell type ---
B_cell
cDC1
cDC2
Langerhans
Macrophage
MigDC
Monocyte
Neutrophil
NK_cell
pDC
T_cell_CD4
T_cell_CD8
T_cell_gd
Treg
Choose species
Mouse
Human
Optional Parameters
Gene Diff Cutoff
Submit
Analyze Cell Polarization
Analyze Cytokine Response
To interpret cell polarization analysis output, please refer to the "Reference Cards" tab above for detailed info of each polarization state.
Submit a gene matrix file to see IREA results here.